Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs2718206 chr1:227437513 G/A 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs2718216 chr1:227421965 C/T 2.48E-10 119 42.82 39.45 12.63 KM Plot
THYM rs2722232 chr7:37876735 C/T 6.42E-5 119 44.38 35 36.83 KM Plot
THYM rs2813428 chr10:1542887 C/A 0.000185 117 39.5 42.82 25.83 KM Plot
THYM rs2813432 chr10:1546669 C/T 0.00015 119 25.83 42.9 40.67 KM Plot
THYM rs2813433 chr10:1546782 C/T 0.00015 119 39.5 44.38 25.83 KM Plot
THYM rs2813434 chr10:1547262 C/T 0.00015 119 39.5 44.38 25.83 KM Plot
THYM rs2813435 chr10:1547272 T/C 0.00015 119 39.5 44.38 25.83 KM Plot
THYM rs2813436 chr10:1547351 G/A 0.000179 117 39.5 44.38 25.83 KM Plot
THYM rs2813945 chr1:227457782 A/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs2813954 chr1:227427671 C/T 0.000137 118 42.9 37.13 19.63 KM Plot
THYM rs2813963 chr1:227445254 C/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs2813973 chr1:227428406 G/T 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs2813975 chr1:227430991 A/C 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs2813982 chr1:227440280 G/A 0.000123 119 42.82 37.13 19.63 KM Plot